BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A03LP1|AL427235
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig702 1071 0.0
3x_Contig909 358 9e-99
>3x_Contig702
Length = 2831
Score = 1071 bits (538), Expect = 0.0
Identities = 549/553 (99%), Gaps = 1/553 (0%)
Strand = Plus / Minus
Query: 1 aattgacggtacttttacgtcgagatmgctgcctctgttcaacacttgattgamatcaag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 554 aattgacggtacttttacgtcgagatcgctgcctctgttcaacacttgattgaaatcaag 495
Query: 61 caacttcaacggattatacctgatagtaataattctacgatcgtctganaattgcacatg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 494 caacttcaacggattatacctgatagtaataattctacgatcgtctgaaaattgcacatg 435
Query: 121 gctgttcatctcattccaatcagatggtataacaatcgttttaagtttcttgtccttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gctgttcatctcattccaatcagatggtataacaatcgttttaagtttcttgtccttatt 375
Query: 181 cttctccggttgcaccccagaatcatcagcaccgttatagcctatatgatccgacgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cttctccggttgcaccccagaatcatcagcaccgttatagcctatatgatccgacgactt 315
Query: 241 gtcatgtctatctctggtgcgtttccgtcgtactccaccatctccagcgtcccataaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtcatgtctatctctggtgcgtttccgtcgtactccaccatctccagcgtcccataaatc 255
Query: 301 agcctgtactttggaatgtatattatcatcaatcagaagttccttcagcagtctatttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agcctgtactttggaatgtatattatcatcaatcagaagttccttcagcagtctatttcg 195
Query: 361 cttagaagtcgtcattcttaaatatgcgatgactgccacttgatgaattattatttcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagaagtcgtcattcttaaatatgcgatgactgccacttgatgaattattatttcttc 135
Query: 421 tttcaatataaggtaaacaaatagagaggatagtacctttactagttttagaagagaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tttcaatataaggtaaacaaatagagaggatagtacctttactagttttagaagagaaga 75
Query: 481 atgtctattctaaaaacacattctca-caagaactcacaaagtccgagttatagtaaacg 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 74 atgtctattctaaaaacacattctcagcaagaactcacaaagtccgagttatagtaaacg 15
Query: 540 aaactaacagcaa 552
|||||||||||||
Sbjct: 14 aaactaacagcaa 2
>3x_Contig909
Length = 3333
Score = 358 bits (180), Expect = 9e-99
Identities = 197/200 (98%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 718 tagcaaatatttcccatgatcttgttgctcttcttcgagaaattttcggttactggaaag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3333 tagcaaatatttcccatgatcttgttgctcttcttcgagaaattttcggttactggaaag 3274
Query: 778 gtaaccttggctacagtgactgcatttcatgcactttactgtacccttaccgtcctctgg 837
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3273 gtaaccttggctacagtgactgcatgtcatgcactttactgtacccttaccgtcctctgg 3214
Query: 838 tgtttatgaaagccgttccttgcaatgtgtataaatttgtaggttgtattttatgtgtgt 897
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3213 tgtttatgaaagccgttccttgcaatgtgtataaa-ttgtaggttgtattttatgtgtgt 3155
Query: 898 ttcca-tttgacgtttatgt 916
||||| ||||||||||||||
Sbjct: 3154 ttccattttgacgtttatgt 3135
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6723
Number of Sequences: 1807
Number of extensions: 6723
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)